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Flagship Pioneering

North America, Massachusetts, United States, Cambridge

Description

Flagship Pioneering, based in Cambridge, Massachusetts, is a distinctive venture creation firm operating at the intersection of life sciences and healthcare. Unlike traditional venture capital firms that primarily invest in existing startups, Flagship employs a unique "origination" model, where it invents, launches, and builds breakthrough companies from the ground up. This involves identifying unmet needs, assembling world-class scientific teams, and providing the foundational resources and capital to transform pioneering scientific concepts into viable enterprises. Their approach emphasizes deep scientific exploration and the creation of entirely new platforms and therapeutic modalities.

The firm's rigorous process begins with an "exploration" phase, where Flagship's internal team of scientists and entrepreneurs identifies and validates novel scientific insights. Once a promising concept emerges, Flagship provides the initial capital and operational support to form a "Pre-Company," which then evolves into a fully-fledged enterprise. This hands-on, iterative company-building strategy allows Flagship to maintain significant control and influence over the strategic direction and scientific development of its portfolio companies from their inception. They often act as the sole or lead investor in the earliest stages, committing substantial resources to de-risk and advance the science.

Flagship's commitment to its created companies is substantial and long-term. While the very first capital injection for a new venture can range from approximately $5 million to $25 million to establish the initial team and validate the core concept, Flagship typically invests between $50 million and $100 million into each of its companies over their first few years of development, prior to them raising significant external capital. This comprehensive funding and operational support has enabled the creation of over 100 companies since its inception in 2000, including notable successes like Moderna, which developed a leading mRNA vaccine, and Seres Therapeutics. The companies originated by Flagship have collectively raised over $100 billion in aggregate capital, underscoring the firm's profound impact on the biotech and life sciences landscape.

Investor Profile

Flagship Pioneering has backed more than 279 startups, with 5 new investments in the last 12 months alone. The firm has led 99 rounds, about 35% of its total and boasts 66 exits across its portfolio.

Investment Focus Highlights

  • Concentrates on Series A, Series B, Series C rounds (top funding stages).
  • Majority of deals are located in United States, Canada, Singapore.
  • Strong thematic focus on Biotechnology, Health Care, Therapeutics.
  • Led 3 rounds in the past year.
  • Typical check size: $5M – $25M.

Stage Focus

  • Series A (24%)
  • Series B (24%)
  • Series C (18%)
  • Series Unknown (16%)
  • Series D (7%)
  • Series E (4%)
  • Seed (3%)
  • Private Equity (1%)
  • Series F (1%)
  • Post Ipo Equity (1%)

Country Focus

  • United States (96%)
  • Canada (1%)
  • Singapore (1%)
  • United Kingdom (1%)

Industry Focus

  • Biotechnology
  • Health Care
  • Therapeutics
  • Medical
  • Pharmaceutical
  • Software
  • Health Diagnostics
  • Life Science
  • Manufacturing
  • Biopharma
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FAQ

Frequently Asked Questions

Learn who this investor regularly partners with—both firms and angels—and explore their latest activity.

Who does Flagship Pioneering frequently co-invest with?

Alaska Permanent Fund
North America, Alaska, United States, Juneau
Co-Investments: 13
Kleiner Perkins
North America, California, United States, Menlo Park
Co-Investments: 11
General Catalyst
North America, Massachusetts, United States, Cambridge
Co-Investments: 10
Third Rock Ventures
North America, Massachusetts, United States, Boston
Co-Investments: 9
Atlas Venture
North America, Massachusetts, United States, Cambridge
Co-Investments: 11
Polaris Partners
North America, Massachusetts, United States, Boston
Co-Investments: 49
+ND Capital
North America, California, United States, San Mateo
Co-Investments: 10
Venrock
North America, California, United States, Palo Alto
Co-Investments: 10
ARCH Venture Partners
North America, Illinois, United States, Chicago
Co-Investments: 26
Fidelity
North America, Massachusetts, United States, Boston
Co-Investments: 11

Which angels does Flagship Pioneering often collaborate with?

JR
North America, California, United States, San Francisco
Shared Deals: 1
KH
North America, California, United States, San Diego
Shared Deals: 1
WH
North America, Massachusetts, United States, Boston
Shared Deals: 1
TA
North America, Massachusetts, United States, Cambridge
Shared Deals: 1
BN
North America, Massachusetts, United States, Boston
Shared Deals: 1
Shared Deals: 1
MB
North America, Massachusetts, United States, Boston
Shared Deals: 1
BH
North America, California, United States, Palo Alto
Shared Deals: 1
SH
North America, California, United States, Santa Monica
Shared Deals: 1
RA
Europe, Rostov, Russian Federation, Novaya
Shared Deals: 1

What are some of recent deals done by Flagship Pioneering?

Terrana Biosciences

Cambridge, Massachusetts, United States

Terrana's innovative technology platform uses RNA-based plant health solutions to enable resilient agriculture for a world.

AgricultureBiotechnology
Series UnknownJul 1, 2025
Amount Raised: $50,000,000
Etiome

Cambridge, Massachusetts, United States

Etiome, a company redefining how we detect and preempt disease progression.

Biotechnology
Series AApr 24, 2025
Amount Raised: $50,000,000
Ampersand Biomedicines

Boston, Massachusetts, United States

Ampersand Biomedicines is a multi-product platform that develops programmable medicines that target disease sites precisely.

BiopharmaBiotechnologyMedicalTherapeutics
Series BMar 19, 2025
Amount Raised: $65,000,000
Lila Sciences

Cambridge, Massachusetts, United States

Lila Sciences creates a scientific superintelligence platform and autonomous labs for life sciences, chemistry, and materials science.

Artificial Intelligence (AI)Life ScienceSoftware
SeedMar 10, 2025
Amount Raised: $200,000,000
Inari

Cambridge, Massachusetts, United States

Inari is a seed design and biotechnology company developing seeds for a nature-positive food system.

AgricultureAgTechBiotechnologySustainability
Series GJan 7, 2025
Amount Raised: $144,000,000
Mirai Bio

Cambridge, Massachusetts, United States

Mirai Bio provides access to end-to-end development capabilities with innovation at every step.

BiopharmaBiotechnologyPharmaceutical
Series ASep 26, 2024
Amount Raised: $50,000,000
Prologue Medicines

Cambridge, Massachusetts, United States

Prologue Medicines creates transformative medicines by systematically discovering and evaluating viral proteins and their unique features.

Health CareMedicalPharmaceutical
Series AMay 7, 2024
Amount Raised: $50,000,000
Inari

Cambridge, Massachusetts, United States

Inari is a biotechnology company that aims to transform agriculture and its impact on society and the environment.

AgricultureAgTechBiotechnologySustainability
Series FJan 30, 2024
Amount Raised: $103,000,000
Syros Pharmaceuticals

Watertown, Massachusetts, United States

Syros Pharmaceuticals is a life sciences company that focuses on treating diseases by mapping gene regulatory circuits.

BiotechnologyGeneticsLife SciencePharmaceutical
Post Ipo EquityDec 19, 2023
Amount Raised: $45,000,000
Quotient Therapeutics

London, England, United Kingdom

Quotient Therapeutics engages in transformative medicines made possible with somatic genomics.

BiotechnologyLife ScienceMedical
SeedNov 21, 2023
Amount Raised: $50,000,000